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Image Search Results
Journal: Nature Communications
Article Title: Nuclear actin polymerization rapidly mediates replication fork remodeling upon stress by limiting PrimPol activity
doi: 10.1038/s41467-023-43183-5
Figure Lengend Snippet: a iPOND analysis of HEK293T cells after indicated treatments (100 nM CPT, 1 h; 100 nM LatB, 10 min prior to CPT). See Supplementary Fig. for details. Proteins associated with nascent DNA were isolated by iPOND and detected with the indicated antibodies. In the control (Ctrl) experiment, the click reaction is performed using DMSO instead of biotin azide. Same representative experiment as in Fig. . b Graph-bar depicts mean and SD of quantified RAD51 and SMARCAL1 levels at nascent DNA from three independent iPOND experiments (black dots). Values are normalized to H3 and represented as fold change over the NT sample. Statistical analysis: one-tailed t-test with Welch’s correction. c , d Electron micrographs of representative replication forks from U2OS cells: parental (P) and daughter (D) duplexes. d White arrow indicates the regressed arm (R); the four-way junction at the reversed fork is in the inset. Scale bar = 200 nm, 40 nm in the inset. e Frequency of reversed replication forks isolated from U2OS cells upon optional treatment with 100 nM CPT for 1 h. 100 nM LatB or Swi were added 10 min before CPT and retained during the genotoxic treatment. Total number of molecules analyzed per condition in brackets. f Frequency of reversed replication forks isolated from RPE-1 cells after 24 h doxycycline-induction of either BFP-NLS or NLS-BFP-Actin R62D and optional treatment with CPT (100 nM, 1 h) or ETP (20 nM, 1 h). Total number of molecules analyzed per condition in brackets. e , f Bar graphs depict mean ± SD from three independent EM experiments (red and blue dots, respectively). Statistical analysis: ordinary one-way ANOVA. Source data are provided as a Source Data file.
Article Snippet: Proteins were resolved by electrophoresis using NuPAGE Novex 4–20% Bis-Tris gels and detected by Western blotting with the indicated antibodies: rabbit anti-Histone H3 (1:10000, abcam; ab1791), mouse anti-Pcna (1:2000, Santa-Cruz; sc-56), mouse anti-Actin (1:1000, Abcam; A5441), rabbit anti-Smarcal1 (1:1000, abcam; ab2559972),
Techniques: Isolation, One-tailed Test
Journal: International Journal of Medical Sciences
Article Title: IER5 is involved in DNA Double-Strand Breaks Repair in Association with PAPR1 in Hela Cells
doi: 10.7150/ijms.21510
Figure Lengend Snippet: IER5 regulates NHEJ-mediated DSB repair. a. Western blot indicating IER5 and 53BP1 knockdown by specific siRNAs. b. FACS analyses of NHEJ assay in Hela cells treated with IER5 and 53BP1 siRNAs. c. Quantification of the NHEJ assay. d. Western blot indicating IER5 and RAD51 knockdown in Hela cells upon treatment with specific siRNAs. e. Efficiency of HR, as analyzed by FACS. f. Quantification of the HR assay.
Article Snippet: Antibodies used in this study: anti-IER5 goat polyclonal antibody (Abcam), anti-IER5 rabbit polyclonal antibody (Santa Cruz), anti-GAPDH mouse monoclonal antibody (Zhong Shan Jin Qiao), anti-PARP1 rabbit monoclonal antibody (Santa Cruz), anti-Ku70 mouse monoclonal antibody (Abcam), anti-Ku80 rabbit monoclonal antibody (Santa Cruz), anti-FLAG M2 mouse monoclonal antibody (Sigma), anti-53BP1 rabbit polyclonal antibody (Santa Cruz),
Techniques: Western Blot, Knockdown, NHEJ Assay